The detailed information of tRNA gene sequence


Sequence ID>WENV170646561
Genome IDJQIA01000043
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 19429
End posion on genome 19504
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaccttttaT
tRNA gene sequence 
GGCCCCTTAGCTCAGTTGGTTAGAGCATACGACTCATAATCGTCAGGTCCCCCGTTCGAG
TCGGGGAGGGGCCAGat
Downstream region at tRNA end position 
caaataccat
Secondary structure (Cloverleaf model)
>WENV170646561	Met	CAT
                   T      AGat caaataccat
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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