The detailed information of tRNA gene sequence


Sequence ID>WENV170646624
Genome IDJQIA01000558
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 14578
End posion on genome 14654
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaattatt
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCAAGGTTCGAG
TCCTTGTGGGACCACAA
Downstream region at tRNA end position 
aagcaactct
Secondary structure (Cloverleaf model)
>WENV170646624	Met	CAT
                   t      ACAA aagcaactct
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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