The detailed information of tRNA gene sequence


Sequence ID>WENV170646632
Genome IDJQIA01000643
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 12402
End posion on genome 12491
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcctttatt
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGTGACCGTC
TCCAGGGTTCGAATCCCTGTCTGTCCGCCA
Downstream region at tRNA end position 
taaaaacata
Secondary structure (Cloverleaf model)
>WENV170646632	Ser	GGA
                   t      GCCA taaaaacata
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGTGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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