The detailed information of tRNA gene sequence


Sequence ID>WENV170646729
Genome IDJQIA01002224
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 1383
End posion on genome 1456
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctggaattct
tRNA gene sequence 
GGCGTCGTGGCCGAGTGGCTAGGCCGGGCTCTGCAAAAGCTCTTACAGCGGTTCGAATCC
GCTCGACGCCTCAA
Downstream region at tRNA end position 
aaaaaaacct
Secondary structure (Cloverleaf model)
>WENV170646729	Cys	GCA
                   t      TCAA aaaaaaacct
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        C     TTAC
                    G - C
                    G + T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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