The detailed information of tRNA gene sequence


Sequence ID>WENV170646780
Genome IDJQIA01002958
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 2505
End posion on genome 2421
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gggacttatt
tRNA gene sequence 
GCGGGCGTGGTGGAATTGGTAGACACGCTAGACTTAGGATCTAGTGCCGCGAGGTGTGAG
AGTTCGAGTCTCTCCGCCTGTACAA
Downstream region at tRNA end position 
actaagcctt
Secondary structure (Cloverleaf model)
>WENV170646780	Leu	TAG
                   t      ACAA actaagcctt
                     G + T
                     C - G
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G A G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCGCGAGGTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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