The detailed information of tRNA gene sequence


Sequence ID>WENV170646799
Genome IDJQIA01003432
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 4874
End posion on genome 4783
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaatattct
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCTTTAAATCC
CATCGAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
tgctttagct
Secondary structure (Cloverleaf model)
>WENV170646799	Ser	GCT
                   t      ACCA tgctttagct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGCTTTAAATCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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