The detailed information of tRNA gene sequence


Sequence ID>WENV170646800
Genome IDJQIA01003441
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 162
End posion on genome 76
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctaaaattta
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCGACGGGTGACTGTCGCC
AGGGTTCGAGTCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
aattttactt
Secondary structure (Cloverleaf model)
>WENV170646800	Ser	GCT
                   a      GCAA aattttactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G A C C       C A G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CGACGGGTGACTGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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