The detailed information of tRNA gene sequence


Sequence ID>WENV170646847
Genome IDJQIA01004398
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 2863
End posion on genome 2960
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acttgctgtt
tRNA gene sequence 
GGAAGTGGAAAGGGCACTGGTGGCCCTCCCGGACTTCAAATCCGGTGTGCCGGGTGAACA
GCCCGGCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
cgttacattt
Secondary structure (Cloverleaf model)
>WENV170646847	SeC(p)	TCA
                   t      GCCA cgttacattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G G        C     TGTGCCGGGTGAACAGCCCGGCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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