The detailed information of tRNA gene sequence


Sequence ID>WENV170646858
Genome IDJQIA01004503
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 1340
End posion on genome 1418
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gctacaaaat
tRNA gene sequence 
AGTCTCAGGGTCTGCTAGGTGTGGACGCCTCCCTGTCACGGAGGAGATCAGGACGGTTCG
AATCCGTTTGGGACTGCAA
Downstream region at tRNA end position 
aattccctac
Secondary structure (Cloverleaf model)
>WENV170646858	Asp	GTC
                   t      GCAA aattccctac
                     A - T
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    G     T T G C C     A
      T C G        G      + | | | |     G
    A       T C T G       G A C G G     C
    G       + | | |                 T T
    G       G G A C
      T G T        G     AGATCAG
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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