The detailed information of tRNA gene sequence


Sequence ID>WENV170647072
Genome IDJQIA01009470
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 2524
End posion on genome 2615
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgatttttg
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTGGGGGTTAGACTC
CACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aaatagaaaa
Secondary structure (Cloverleaf model)
>WENV170647072	Ser	GCT
                   g      GCCA aaatagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTGGGGGTTAGACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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