The detailed information of tRNA gene sequence


Sequence ID>WENV170647205
Genome IDJQIA01015985
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 3215
End posion on genome 3289
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cacactttat
tRNA gene sequence 
GGCCCCATCGTCTAGCGGTTAGGACGACGGCCTCTCACGCCGTAAACAGGGGTTCGATTC
CCCTTGGGGTCACCA
Downstream region at tRNA end position 
tagatattca
Secondary structure (Cloverleaf model)
>WENV170647205	Glu	CTC
                   t      ACCA tagatattca
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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