The detailed information of tRNA gene sequence


Sequence ID>WENV170647213
Genome IDJQIA01016469
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 771
End posion on genome 847
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaagaataaa
tRNA gene sequence 
GGCGGACTAGCTCTAACTGGCAGAGCAGGGGTCTCCAAAGCCCAGGGTTGGGGGTTCGAA
TCCCTCGTCCGTTGCCA
Downstream region at tRNA end position 
atttaaaaat
Secondary structure (Cloverleaf model)
>WENV170647213	Trp	CCA
                   a      GCCA atttaaaaat
                     G + T
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    G   A
                    G - C
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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