The detailed information of tRNA gene sequence


Sequence ID>WENV170647352
Genome IDJQIA01022037
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 2888
End posion on genome 2961
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaatctcaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCTAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170647352	Met	CAT
                   a      Annn nnnnnnnnnn
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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