The detailed information of tRNA gene sequence


Sequence ID>WENV170647389
Genome IDJQIA01024626
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 1397
End posion on genome 1324
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgaatattag
tRNA gene sequence 
GGCGCGGTGGCAGAGTGGTCATGCAGCGGACTGCAACTCCGTTAACGCCGGTTCGATTCC
GACCCGCGCCTCCA
Downstream region at tRNA end position 
attcaaagtg
Secondary structure (Cloverleaf model)
>WENV170647389	Cys	GCA
                   g      TCCA attcaaagtg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T C        A     TAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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