The detailed information of tRNA gene sequence


Sequence ID>WENV170647433
Genome IDJQIA01026802
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 1833
End posion on genome 1758
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caacttacgt
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGTCGGTTCGATC
CCGTCTGGCTCCACCA
Downstream region at tRNA end position 
cccattttat
Secondary structure (Cloverleaf model)
>WENV170647433	Ala	GGC
                   t      ACCA cccattttat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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