The detailed information of tRNA gene sequence


Sequence ID>WENV170647497
Genome IDJQIA01031994
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 900
End posion on genome 826
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tctgactaat
tRNA gene sequence 
GGGCCGGTCGTCTAGTCCGGTAGGATAGGTGCATGGCATGCATCGGATCGAGGGTTCAAA
TCCCTTCCGGTCCACtt
Downstream region at tRNA end position 
tttttcagtt
Secondary structure (Cloverleaf model)
>WENV170647497	Ala	GGC
                   t      ACtt tttttcagtt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      + | | | |     A
    C       T C T G       G A G G G     C
    C       + | | +                 T T
    G       G G A T
      G T A        A     GGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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