The detailed information of tRNA gene sequence


Sequence ID>WENV170649662
Genome IDJRYC01053560
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1568
End posion on genome 1479
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggttttcgc
tRNA gene sequence 
GGAAAGGTGCAAGAGCGGTTGAATTGGCAGCATTGGAAATGCTGTGAGCCTTAACGGGTT
CCGTGGGTTCGAATCCCACCCTTTCCGCCA
Downstream region at tRNA end position 
tataattagg
Secondary structure (Cloverleaf model)
>WENV170649662	Ser	GGA
                   c      GCCA tataattagg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A A C       G T G G G     C
    G         | | |                 T T
    T       A T T G
      T G A        G     TGAGCCTTAACGGGTTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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