The detailed information of tRNA gene sequence


Sequence ID>WENV170649721
Genome IDJRYC01090601
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1174
End posion on genome 1260
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aaacgaatgt
tRNA gene sequence 
GCGGACGTGGCGGAACTGGTAGACGCGCAGGTCTCAGAAGCCTGTTCTGGTTACAGAGTG
GAAGTTCGATTCTTCTCGTCCGCACCA
Downstream region at tRNA end position 
aattataact
Secondary structure (Cloverleaf model)
>WENV170649721	Leu	CAG
                   t      ACCA aattataact
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T C T T C     A
      C A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTGGTTACAGAGT
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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