The detailed information of tRNA gene sequence


Sequence ID>WENV170649908
Genome IDJRYD01000380
Search identical group
Phylum/Class[JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO
Species
Start position on genome 41694
End posion on genome 41618
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cattcgaaat
tRNA gene sequence 
GGTCCCGTAGCTCAGTTGGATAGAGCGTCCGCCTCCTAAGCGGAAGGCCGCTGGTTCGAA
TCCAGCCGGGACCACCA
Downstream region at tRNA end position 
attacccgta
Secondary structure (Cloverleaf model)
>WENV170649908	Arg	CCT
                   t      ACCA attacccgta
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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