The detailed information of tRNA gene sequence


Sequence ID>WENV170649910
Genome IDJRYD01000381
Search identical group
Phylum/Class[JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO
Species
Start position on genome 46930
End posion on genome 47019
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggttcgcgct
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTGAATCGGGCAGTCTCGAAAATTGTTGTGCCTTAACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttctttt
Secondary structure (Cloverleaf model)
>WENV170649910	Ser	CGA
                   t      GCCA tttttctttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTGCCTTAACGGGTACC
                    G + T
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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