The detailed information of tRNA gene sequence


Sequence ID>WENV170650115
Genome IDJRYD01012127
Search identical group
Phylum/Class[JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO
Species
Start position on genome 11508
End posion on genome 11592
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ggccctgatc
tRNA gene sequence 
GCGGGCGTGGCGGAATTGGTAGACGCGCTGGATTTAGGTTCCAGTGGCGAAAGTCGTGGG
GGTTCGAGTCCCTCCGCCCGCACCA
Downstream region at tRNA end position 
gggcctacct
Secondary structure (Cloverleaf model)
>WENV170650115	Leu	TAG
                   c      ACCA gggcctacct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGCGAAAGTCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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