The detailed information of tRNA gene sequence


Sequence ID>WENV170650480
Genome IDJRYE01001374
Search identical group
Phylum/Class[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
Species
Start position on genome 944
End posion on genome 1039
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtttagccgc
tRNA gene sequence 
GGAGGCGTTTGGGTTCCTGGTGGTCCCCCCGGTCTTCAAAACCGGTGAGATCGAGTAGCT
CGGTCTGGCGGGTTCGATTCCCGTTCGCCTCCGCCA
Downstream region at tRNA end position 
gtcgtcgacg
Secondary structure (Cloverleaf model)
>WENV170650480	SeC(p)	TCA
                   c      GCCA gtcgtcgacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   T          T T
                    T     T G C C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       T C C C
      T G G        C     TGAGATCGAGTAGCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK