The detailed information of tRNA gene sequence


Sequence ID>WENV170650564
Genome IDJRYE01004079
Search identical group
Phylum/Class[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
Species
Start position on genome 3220
End posion on genome 3146
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aaggttttgt
tRNA gene sequence 
TGGGGCGTCGCCAAGCGGTAAGGCACCGGGTTTTGATCCCGGCATTCGCAGGTTCGAATC
CTGCCGCCCCAGCCA
Downstream region at tRNA end position 
cgccgcgacg
Secondary structure (Cloverleaf model)
>WENV170650564	Gln	TTG
                   t      GCCA cgccgcgacg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        C      | | | | |     G
      C     A C C G       G C A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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