The detailed information of tRNA gene sequence


Sequence ID>WENV170650580
Genome IDJRYE01004834
Search identical group
Phylum/Class[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
Species
Start position on genome 1676
End posion on genome 1599
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tctactttgc
tRNA gene sequence 
GGGGTCGTAGTTCAGTTTGGTTAGAACGCCAGCCTGTCACGTTGGAGGTCGCGGGTTCGA
GCCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ctttcacttc
Secondary structure (Cloverleaf model)
>WENV170650580	Asp	GTC
                   c      GCCA ctttcacttc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          C G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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