The detailed information of tRNA gene sequence


Sequence ID>WENV170650691
Genome IDJRYE01010391
Search identical group
Phylum/Class[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
Species
Start position on genome 2473
End posion on genome 2381
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatgcagaac
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTAAGCGGCTTAACCCC
GCTTCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
cacttgattc
Secondary structure (Cloverleaf model)
>WENV170650691	Ser	GGA
                   c      GCCA cacttgattc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAGCGGCTTAACCCCGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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