The detailed information of tRNA gene sequence


Sequence ID>WENV170650879
Genome IDJRYE01044519
Search identical group
Phylum/Class[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
Species
Start position on genome 368
End posion on genome 283
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGCAGGTTGCCCGAGCGGCCAATGGGAGCGGACTGTAAATCCGTCGGCGTATGCCTACAG
TGGTTCGAATCCACTACCTGCCACCT
Downstream region at tRNA end position 
tgatcaggcc
Secondary structure (Cloverleaf model)
>WENV170650879	Tyr	GTA
                   a      ACCT tgatcaggcc
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T C A C C     A
      C G A        G      | | | | |     G
    G       G C C C       A G T G G     C
    G       + | | |                 T T
    C       T G G G
      C A A        A     CGGCGTATGCCTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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