The detailed information of tRNA gene sequence


Sequence ID>WENV170650930
Genome IDJRYE01070928
Search identical group
Phylum/Class[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
Species
Start position on genome 103
End posion on genome 179
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattcttgat
tRNA gene sequence 
GGCGCTTTAGCTCAGCCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCGGGGTTCGAG
TCCCTGATGCGCCACCA
Downstream region at tRNA end position 
ccctttcctt
Secondary structure (Cloverleaf model)
>WENV170650930	Met	CAT
                   t      ACCA ccctttcctt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T   T
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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