The detailed information of tRNA gene sequence


Sequence ID>WENV170651123
Genome IDJRYF01001039
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 43216
End posion on genome 43140
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
caaggcaaat
tRNA gene sequence 
GGCCGCGTAGTTCAACTGGATAGAATATCAGATTTCGGCTCTGAGGGTTGGGGGTTCGAA
TCCTCCCGCGGTCACAA
Downstream region at tRNA end position 
aacgatttag
Secondary structure (Cloverleaf model)
>WENV170651123	Arg	TCG
                   t      ACAA aacgatttag
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G G G G G     C
    G       | | | +                 T T
    G       G A A T
      A T A        A     GGGTT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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