The detailed information of tRNA gene sequence


Sequence ID>WENV170651315
Genome IDJRYF01006414
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1392
End posion on genome 1468
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgtccgcacg
tRNA gene sequence 
CTGCCCGTAGCTCAACTGGATAGAGCAGCGGCCTTCTAAGCCGCAGGTCGGGGGTTCGAG
TCCCTCCGGGCAGGCCA
Downstream region at tRNA end position 
ccgtcacgta
Secondary structure (Cloverleaf model)
>WENV170651315	Arg	TCT
                   g      GCCA ccgtcacgta
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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