The detailed information of tRNA gene sequence


Sequence ID>WENV170651456
Genome IDJRYF01020318
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2090
End posion on genome 2014
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acgggaaaat
tRNA gene sequence 
CGGGGTGTAGCTCAGTTTGGTAGAGTGCACGGTTCGGGACCGTGAGGTCGCTGGTTCAAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
tgaggaaaag
Secondary structure (Cloverleaf model)
>WENV170651456	Pro	CGG
                   t      ACCA tgaggaaaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | |   | |     A
    T       C T C G       G C T G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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