The detailed information of tRNA gene sequence


Sequence ID>WENV170652967
Genome IDJRYI01000047
Search identical group
Phylum/Class[JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO
Species
Start position on genome 11635
End posion on genome 11545
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaaaggctt
tRNA gene sequence 
GGAAAGGTGCAGGAGTGGTTGAACTGGCAGCACTGGAAATGCTGTGTACCTCAAAAGGGT
ACCGTGGGTTCGAATCCCACCCTTTCCGCCA
Downstream region at tRNA end position 
cgaaatagtg
Secondary structure (Cloverleaf model)
>WENV170652967	Ser	GGA
                   t      GCCA cgaaatagtg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G T G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TGTACCTCAAAAGGGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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