The detailed information of tRNA gene sequence


Sequence ID>WENV170653166
Genome IDJRYI01009083
Search identical group
Phylum/Class[JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO
Species
Start position on genome 1284
End posion on genome 1208
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gacgcggatt
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTTAGAGCGCCGCCCTGTCACGGCGGAGGCCGCGGGTTCAAG
TCCCGTCTCTCGCGCCA
Downstream region at tRNA end position 
ttttttccag
Secondary structure (Cloverleaf model)
>WENV170653166	Asp	GTC
                   t      GCCA ttttttccag
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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