The detailed information of tRNA gene sequence


Sequence ID>WENV170653281
Genome IDJRYI01045867
Search identical group
Phylum/Class[JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO
Species
Start position on genome 30
End posion on genome 120
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctgccacac
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCTAAGGAGCACGCCTCGAAAGCGTGTGAGGGGTAACCCCCC
TCCGAGGGTTCAAATCCCTCCGCCACCGCCA
Downstream region at tRNA end position 
taagctcccc
Secondary structure (Cloverleaf model)
>WENV170653281	Ser	CGA
                   c      GCCA taagctcccc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGAGGGGTAACCCCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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