The detailed information of tRNA gene sequence


Sequence ID>WENV170653490
Genome IDJRYJ01002332
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3729
End posion on genome 3654
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgctcgtttc
tRNA gene sequence 
GGGGCAGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCGGGAGTTCGATC
CTCCTCTGCTCCACCA
Downstream region at tRNA end position 
ttttccaaag
Secondary structure (Cloverleaf model)
>WENV170653490	Ala	CGC
                   c      ACCA ttttccaaag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C          C T
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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