The detailed information of tRNA gene sequence


Sequence ID>WENV170653505
Genome IDJRYJ01002947
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 13536
End posion on genome 13611
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctccctcgt
tRNA gene sequence 
GGCGAATTAGCTCAGCGGTTAGAGCAGCGGAATCATAATCCGTTGGTCCGGGGTTCAAAT
CCCTGATTCGCCACCA
Downstream region at tRNA end position 
tttgacccct
Secondary structure (Cloverleaf model)
>WENV170653505	Met	CAT
                   t      ACCA tttgacccct
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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