The detailed information of tRNA gene sequence


Sequence ID>WENV170653882
Genome IDJRYK01000128
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 141
End posion on genome 57
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgactgaagc
tRNA gene sequence 
GGAGGGTTGGCCGAGCGGCTTAAGGCGCGAGTTTCGAAAACTCGTGGGAGCAATCCCTCA
CAGGTTCGAATCCTGTACCCTCCACtc
Downstream region at tRNA end position 
gttgaagcga
Secondary structure (Cloverleaf model)
>WENV170653882	Ser	CGA
                   c      ACtc gttgaagcga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G C C G       A C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGGGAGCAATCCCTC
                    C - G
                    G - C
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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