The detailed information of tRNA gene sequence


Sequence ID>WENV170654053
Genome IDJRYK01005355
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 17629
End posion on genome 17555
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcctttccc
tRNA gene sequence 
GGCCCGTTCGTCTAGGGGTTAGGACACAAGATTTTCATTCTTGGAACAGGGGTTCGATTC
CCCTACGGGCTACTA
Downstream region at tRNA end position 
agataattta
Secondary structure (Cloverleaf model)
>WENV170654053	Glu	TTC
                   c      ACTA agataattta
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     GAAC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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