The detailed information of tRNA gene sequence


Sequence ID>WENV170654094
Genome IDJRYK01008589
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 14314
End posion on genome 14405
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatacaacc
tRNA gene sequence 
GGAGAGGTGACCGAGCGGCCGAAGGTGCACGCCTGGAAAGTGTGTAGGGGGTTAACGCTC
CCTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttcaag
Secondary structure (Cloverleaf model)
>WENV170654094	Ser	GGA
                   c      GCCA ttttttcaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TAGGGGGTTAACGCTCCCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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