The detailed information of tRNA gene sequence


Sequence ID>WENV170654160
Genome IDJRYK01017867
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1112
End posion on genome 1187
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagcgcccat
tRNA gene sequence 
GGGCCCGTAGCTCAATGGTCAGAGCAGGGCGCTCATAACGCCTTGGTTGGGGGTTCAAGT
CCCTCCGGGCCTACCA
Downstream region at tRNA end position 
tcccggcgcg
Secondary structure (Cloverleaf model)
>WENV170654160	Met	CAT
                   t      ACCA tcccggcgcg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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