The detailed information of tRNA gene sequence


Sequence ID>WENV170654263
Genome IDJRYK01050055
Search identical group
Phylum/Class[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
Species
Start position on genome 156
End posion on genome 82
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acagccgtca
tRNA gene sequence 
GGTCCCATCGTCTAGCGGTTAGGACATCGGCCTCTCACGCCGGTAACGCGGGTTCGATTC
CCGCTGGGATCGCCA
Downstream region at tRNA end position 
aagcctccac
Secondary structure (Cloverleaf model)
>WENV170654263	Glu	CTC
                   a      GCCA aagcctccac
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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