The detailed information of tRNA gene sequence


Sequence ID>WENV170656034
Genome IDJTFN01119172
Search identical group
Phylum/Class[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
Species
Start position on genome 304
End posion on genome 217
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcaggtaa
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGTCGAAGGCGGGCGCTTGGAGAGCGTCTGAACCGCGAGGTTCC
GTGAGTTCGAATCTCACCTTCTCCGCCA
Downstream region at tRNA end position 
tgaatattta
Secondary structure (Cloverleaf model)
>WENV170656034	Ser	GGA
                   a      GCCA tgaatattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAACCGCGAGGTTCC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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