The detailed information of tRNA gene sequence


Sequence ID>WENV170656321
Genome IDJTFO01010033
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1469
End posion on genome 1545
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggcgtattat
tRNA gene sequence 
GCGCTCGTAGCTCAACCGGATAGAGCAACGGCCTTCTAAGCCGTAGGTTGCAGGTTCGAG
TCCTGCCGGGCGTGCCA
Downstream region at tRNA end position 
ggtcgtcagg
Secondary structure (Cloverleaf model)
>WENV170656321	Arg	TCT
                   t      GCCA ggtcgtcagg
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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