The detailed information of tRNA gene sequence


Sequence ID>WENV170656976
Genome IDJTFO01065652
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1644
End posion on genome 1555
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnacacacaa
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACTCGTAAGGGTA
CCGGGGGTTCGAATCCCCCCGCTTCCGCGA
Downstream region at tRNA end position 
aagagagctc
Secondary structure (Cloverleaf model)
>WENV170656976	Ser	GCT
                   a      GCGA aagagagctc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGTAAGGGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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