The detailed information of tRNA gene sequence


Sequence ID>WENV170657400
Genome IDJTFO01142032
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 189
End posion on genome 266
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaagggagt
tRNA gene sequence 
CGGGAGGTAGCGCAGTCTGGTAAGCGTACGTGCCTTGGGAGCACGGGGTCGTGAGTTCGA
ATCTCACTCTCCCGACCA
Downstream region at tRNA end position 
ttgtttacac
Secondary structure (Cloverleaf model)
>WENV170657400	Pro	TGG
                   t      ACCA ttgtttacac
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C T C     A
    C T G A        A      | | | | |     G
  T         C G C G       G T G A G     C
  G         | | | +                 T T
  G         G C G T
    T A A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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