The detailed information of tRNA gene sequence


Sequence ID>WENV170657831
Genome IDJTFP01024457
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 178
End posion on genome 89
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gttgagatcc
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCAAGGGTTCGAATCCCTTCCTCACCGCCA
Downstream region at tRNA end position 
gttaaaaaag
Secondary structure (Cloverleaf model)
>WENV170657831	Ser	GGA
                   c      GCCA gttaaaaaag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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