The detailed information of tRNA gene sequence


Sequence ID>WENV170658023
Genome IDJTFP01046542
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 116
End posion on genome 211
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttcacttc
tRNA gene sequence 
GGGAGTAGTTCGTAGTCTGGTGACGCGCCCGGTCTTCAAAACCGGTGGGGGGCGTATCCC
GTCCCCGGTGGGTTCGATTCCCATCTGCTCCCGCCA
Downstream region at tRNA end position 
taatttccac
Secondary structure (Cloverleaf model)
>WENV170658023	SeC(p)	TCA
                   c      GCCA taatttccac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G - C          T T
                    T     T A C C C     A
      C T G        T      + | | | |     G
    T       A T G C       G T G G G     C
    G         + | |                 T T
    G       C G C G
      T G A        C     TGGGGGGCGTATCCCGTCCCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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