The detailed information of tRNA gene sequence


Sequence ID>VRL0100052
Genome IDM17490
Search identical group
Phylum/ClassRetroviridae
SpeciesAvian sarcoma virus
Start position on genome 1
End posion on genome 75
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GACCTCGTGGCGCAACGGDAGCGCGTCTGACTCCAGATCAGAAGGCTGCGTGTTCGAATC
ACGTCGGGGTCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>VRL0100052	Trp	CCA
                   n      ACCA nnnnnnnnnn
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T G C A C     A
        A A        G      + | | | |     G
      C     C G C G       G C G T G     C
      G     | | | |                 T T
      G     G C G C
        D A        G     AGGCT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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