The detailed information of tRNA gene sequence


Sequence ID>WENV170663466
Genome IDJYMV01005846
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 189703
End posion on genome 189789
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttattgttt
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTAACGGAGCAGATTGCTAATCTGTCAGCGCGTAAGTGCTGCC
CGGGTTCGAGTCCCGGTCTCTCCGCAA
Downstream region at tRNA end position 
aaaaaatcac
Secondary structure (Cloverleaf model)
>WENV170663466	Ser	GCT
                   t      GCAA aaaaaatcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G G C C       C C G G G     C
      G       | | |                 T T
      G     A C G G
        T A        A     CAGCGCGTAAGTGCTGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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