The detailed information of tRNA gene sequence


Sequence ID>WENV170663884
Genome IDJYMV01010332
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 8681
End posion on genome 8757
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgaatttg
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGTGGAATCATAATCCACGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACGA
Downstream region at tRNA end position 
tgaaacgcca
Secondary structure (Cloverleaf model)
>WENV170663884	Met	CAT
                   g      ACGA tgaaacgcca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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