The detailed information of tRNA gene sequence


Sequence ID>WENV170663990
Genome IDJYMV01011545
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 11426
End posion on genome 11351
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttatattttt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCAGCGTTCGCAATGCTGAGGTCGAGGGTTCGACC
CCCTTCGGCTCCACAA
Downstream region at tRNA end position 
tataacggaa
Secondary structure (Cloverleaf model)
>WENV170663990	Ala	CGC
                   t      ACAA tataacggaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C C
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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